Hello
I am new to Gephi. I have a huge set of data and I couldn't visualize it with Gephi because it was so slow and it is impossible to see the relationships among nodes.
I created a sub set (around 100 node and 250 edges) and I am trying to order the graph and remove the over laps. Also, I want to distinguish the source and target with different colors. I don't want to go over each node manually. is there a way to apply some color to all source node and another color for all target node?
I also want to order the graph. is there a way to list all source nodes in one side and the target nodes on the other side?
Thanks a lot in advance
[FIXED] different color for source and target nodes
- mbastian
- Gephi Architect
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Re: different color for source and target nodes
I guess you have a bipartite graph, to have different nodes for source and target.
You can create a filter to keep only source or target. Go to Filters and create a In-Degree filter (Topology). Move the slider on the right to remove source node and and the contrary for target nodes and then enable 'Filter'. Then once filtered you can apply a color to all nodes with the reset color button (explained here).
You can create a filter to keep only source or target. Go to Filters and create a In-Degree filter (Topology). Move the slider on the right to remove source node and and the contrary for target nodes and then enable 'Filter'. Then once filtered you can apply a color to all nodes with the reset color button (explained here).
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Re: different color for source and target nodes
Thanks a lot that worked 

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Re: different color for source and target nodes
Hello.
I use gephi-0.8-alpha to do colouring of source/target nodes of a graph. And I have a question about the "In Degree Filter": why am I struggling to select nodes with exactly 0 incoming degree? Filter is reset to maximal incoming degree of graph on each repaint if I set upper bound to 0. Is this intended behaviour?
Thanks,
Artem
I use gephi-0.8-alpha to do colouring of source/target nodes of a graph. And I have a question about the "In Degree Filter": why am I struggling to select nodes with exactly 0 incoming degree? Filter is reset to maximal incoming degree of graph on each repaint if I set upper bound to 0. Is this intended behaviour?
Thanks,
Artem
- mbastian
- Gephi Architect
- Posts:728
- Joined:10 Dec 2009 10:11
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Re: different color for source and target nodes
Thanks Artem,
A recent bug fix is touching this area, maybe another bug has been introduced. We'll check it.
In the meantime, for a single value you can use 'Equal' filters instead of 'Range'.
A recent bug fix is touching this area, maybe another bug has been introduced. We'll check it.
In the meantime, for a single value you can use 'Equal' filters instead of 'Range'.
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Re: [FIXED] different color for source and target nodes
Sorry i didnt get that. Could you please tell me the procedure more clearly to color source and target nodes separately? I am not able to find anything in the InDegree filter that allows me to differentiate between Source and Target nodes.